Differences

This shows you the differences between two versions of the page.

--- ode_modelling_toc_diagram [2021/05/05 09:48]
admin created
+++ ode_modelling_toc_diagram [2021/05/05 10:09] (current)
admin
@@ Line 4: / Line 4: @@
 <grid>
 <col xs="12" sm="12" lg="4">
-  - Frameworks / Toolboxes  \\ \\
+  - [[ode_modelling#frameworks_toolboxes|Frameworks / Toolboxes]] \\ \\
-  - Generalization/Benchmarking  \\ \\
+  - [[ode_modelling# generalization_benchmarking |Generalization/Benchmarking]]  \\ \\
-  - Steady States  \\ \\
+  - [[ode_modelling#steady_states|Steady States]]  \\ \\
-  - Input Estimation  \\ \\
+  - [[ode_modelling#input_estimation|Input Estimation ]] \\ \\
-  - Experimental Design  \\ \\
+  - [[ode_modelling#experimental_design|Experimental Design ]] \\ \\
-  - Integration Methods  \\ \\
+  - [[ode_modelling#integration_methods|Integration Methods]]  \\ \\
-  - Optimization/Improving your waterfall plot  \\ \\
+  - [[ode_modelling# optimization_improving_your_waterfall_plot|Optimization/Improving your waterfall plot]]  \\ \\
-  - Parameter Estimation  \\ \\
+  - [[ode_modelling#parameter_estimation|Parameter Estimation]]  \\ \\
-  - Identifiability Analysis / Uncertainty Analysis  \\ \\
+  - [[ode_modelling#identifiability_analysis_uncertainty_analysis|Identifiability Analysis / Uncertainty Analysis]]  \\ \\
-  - Model Reduction  \\ \\
+  - [[ode_modelling#model_reduction|Model Reduction]]  \\ \\
-  - Constraint based optimization  \\ \\
+  - [[ode_modelling#constraint_based_optimization|Constraint based optimization]]  \\ \\
-  - Modelling Technique  \\ \\
+  - [[ode_modelling#modelling_technique|Modelling Technique]]  \\ \\
-  - Data preprocessing / Error estimation  \\ \\
+  - [[ode_modelling#data_preprocessing_error_estimation|Data preprocessing / Error estimation]]  \\ \\
-  - Model Prediction  \\ \\
+  - [[ode_modelling#model_prediction|Model Prediction]]  \\ \\
-  - ODE Motifs  \\ \\
+  - [[ode_modelling#ode_motifs|ODE Motifs]]  \\ \\
-  - Single-Cells   \\ \\
+  - [[ode_modelling#single-cells|Single-Cells]]   \\ \\
@@ Line 194: / Line 194: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#optimization_improving_your_waterfall_plot">
+<a href="doku.php?id=ode_modelling#optimization_improving_your_waterfall_plot">
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@@ Line 212: / Line 212: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#generalization_benchmarking">
+<a href="doku.php?id=ode_modelling#generalization_benchmarking">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 246px; margin-left: 1277px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 228: / Line 228: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#parameter_estimation">
+<a href="doku.php?id=ode_modelling#parameter_estimation">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 636px; margin-left: 692px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 244: / Line 244: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#steady_states">
+<a href="doku.php?id=ode_modelling#steady_states">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 856px; margin-left: 217px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 260: / Line 260: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#integration_methods">
+<a href="doku.php?id=ode_modelling#integration_methods">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 406px; margin-left: 692px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 276: / Line 276: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#frameworks_toolboxes">
+<a href="doku.php?id=ode_modelling#frameworks_toolboxes">
-				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
+<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 246px; margin-left: 1507px;" xmlns="http://www.w3.org/1999/xhtml">
 						<div style="box-sizing: border-box; font-size: 0; text-align: center; ">
@@ Line 293: / Line 309: @@
 			<switch>
- <a href="#input_estimation" >
+ <a href="doku.php?id=ode_modelling #input_estimation" >
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
@@ Line 310: / Line 326: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#experimental_design">
+<a href="doku.php?id=ode_modelling#experimental_design">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 1626px; margin-left: 1707px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 326: / Line 342: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#identifiability_analysis_uncertainty_analysis">
+<a href="doku.php?id=ode_modelling#identifiability_analysis_uncertainty_analysis">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 751px; margin-left: 1247px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 342: / Line 358: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#model_reduction">
+<a href="doku.php?id=ode_modelling#model_reduction">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 1346px; margin-left: 1327px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 358: / Line 374: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#modelling_technique">
+<a href="doku.php?id=ode_modelling#modelling_technique">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 526px; margin-left: 692px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 374: / Line 390: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#data_preprocessing_error_estimation">
+<a href="doku.php?id=ode_modelling#data_preprocessing_error_estimation">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
 					<div style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 198px; height: 1px; padding-top: 456px; margin-left: 37px;" xmlns="http://www.w3.org/1999/xhtml">
@@ Line 392: / Line 408: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#model_prediction">
+<a href="doku.php?id=ode_modelling#model_prediction">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
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@@ Line 408: / Line 424: @@
 		<g transform="translate(-0.5 -0.5)">
 			<switch>
-<a href="#ode_motifs">
+<a href="doku.php?id=ode_modelling#ode_motifs">
 				<foreignObject height="100%" pointer-events="none" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; text-align: left;" width="100%">
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