ode_modelling

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
ode_modelling [2021/05/05 10:29]
admin 		ode_modelling [2021/05/31 17:17]
admin
Line 33: Line 33:
  
 ### 2. dMod ### 2. dMod
 +
 +
 +####   1. Short description
 + * Framework for modelling dynamical systems
 +
 +#### 2. Applicability/restrictions/pitfalls
 +  * Good for modelling medium sized systems.
 +  * (Too much / A lot of) freedom in model setup.
 +
 +#### 3. Code availability and implementations
 +* https://github.com/dkaschek/dMod
 +* https://github.com/dlill/petab
 +
 +#### 4. Other related methods/points
 +* -
 +
 +#### 5. Publications from the Timmer group
 +
 +#### 6. Publications from external groups
 +
 +
 +
 +
  
 ### 3. AMICI/ PESTO / pyPESTO / MEMOIR ### 3. AMICI/ PESTO / pyPESTO / MEMOIR
Line 64: Line 87:
  
 ###      4. IQRtools ###      4. IQRtools
 +
 +Focus on mixed-effects modelling. Interfaces NONMEM and MONOLIX as the two standard estimation tools for non-linear mixed effects models. Supports Quasi-NLME estimation via dMod backaend.
 +
 +* https://iqrtools.intiquan.com/
 +* https://iqdesktop.intiquan.com/book/ for easy setup
  
  
  • ode_modelling.txt
  • Last modified: 2021/06/01 07:16
  • by admin